- AbstractRead - Class in artificialFastqGenerator
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- AbstractRead() - Constructor for class artificialFastqGenerator.AbstractRead
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- addCoveringRead(Read) - Method in class artificialFastqGenerator.Nucleobase
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Add a read to the list of reads which cover this nucleobase.
- analyzeHumanReferenceGenome(String, String, int) - Static method in class artificialFastqGenerator.Genomes
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Conduct an analysis of the human reference genome.
- ArtificialFastqGenerationUtils - Class in artificialFastqGenerator
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ArtificialFastqGenerationUtils consists exclusively of static utility methods that are used in
artificial fastq generation.
- ArtificialFastqGenerationUtils() - Constructor for class artificialFastqGenerator.ArtificialFastqGenerationUtils
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- artificialFastqGenerator - package artificialFastqGenerator
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- ArtificialFastqGenerator - Class in artificialFastqGenerator
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An instance of this class can be used to generate artificial FASTQ files from the human reference genome.
- ArtificialFastqGenerator() - Constructor for class artificialFastqGenerator.ArtificialFastqGenerator
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- ArtificialFastqGenerator.BabyRead - Class in artificialFastqGenerator
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A sequence of nucleobases which may be used to create a read.
- ArtificialFastqGenerator.BabyRead(int, int) - Constructor for class artificialFastqGenerator.ArtificialFastqGenerator.BabyRead
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